Linear mixed-effects models using S4 classes

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Documentation for package ‘lme4’ version 0.999375-28

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anova,mer-method Mixed Model Representations and *mer Methods
as.data.frame,merMCMC-method Mixed-model Markov chain Monte Carlo results
as.matrix,merMCMC-method Mixed-model Markov chain Monte Carlo results
BIC Bayesian Information Criterion
BIC,ANY-method Bayesian Information Criterion
BIC,logLik-method Bayesian Information Criterion
cake Breakage angle of chocolate cakes
cbpp Contagious bovine pleuropneumonia
coef,lmList-method Class "lmList"
coef,mer-method Mixed Model Representations and *mer Methods
coerce,mer,dtCMatrix-method Mixed Model Representations and *mer Methods
coerce,merMCMC,data.frame-method Mixed-model Markov chain Monte Carlo results
coerce,merMCMC,matrix-method Mixed-model Markov chain Monte Carlo results
confint,lmList-method Class "lmList"
densityplot,merMCMC-method Mixed-model Markov chain Monte Carlo results
deviance,mer-method Mixed Model Representations and *mer Methods
deviance,summary.mer-method Mixed Model Representations and *mer Methods
Dyestuff Yield of dyestuff by batch
Dyestuff2 Yield of dyestuff by batch
expand,mer-method Mixed Model Representations and *mer Methods
fitted,mer-method Mixed Model Representations and *mer Methods
fixed.effects Extract the fixed-effects estimates
fixef Extract the fixed-effects estimates
fixef,ANY-method Extract the fixed-effects estimates
fixef,mer-method Extract the fixed-effects estimates
formula,lmList-method Class "lmList"
formula,mer-method Mixed Model Representations and *mer Methods
glmer Fit Mixed-Effects Models
HPDinterval Highest Posterior Density intervals
HPDinterval,matrix-method Highest Posterior Density intervals
HPDinterval,merMCMC-method Highest Posterior Density intervals
lmer Fit Mixed-Effects Models
lmer2 Fit Mixed-Effects Models
lmList List of lm Objects with a Common Model
lmList,formula,data.frame-method List of lm Objects with a Common Model
lmList-class Class "lmList"
logLik,mer-method Mixed Model Representations and *mer Methods
logLik,summary.mer-method Mixed Model Representations and *mer Methods
mcmcsamp Generate an MCMC sample
mcmcsamp,mer-method Generate an MCMC sample
mer-class Mixed Model Representations and *mer Methods
merMCMC-class Mixed-model Markov chain Monte Carlo results
model.frame,mer-method Mixed Model Representations and *mer Methods
model.matrix,mer-method Mixed Model Representations and *mer Methods
nlmer Fit Mixed-Effects Models
Pastes Paste strength by batch and cask
Penicillin Variation in penicillin testing
plot,lmList-method Class "lmList"
plot,lmList.confint-method Class "lmList"
print,mer-method Mixed Model Representations and *mer Methods
qqmath,merMCMC-method Mixed-model Markov chain Monte Carlo results
ranef Extract the modes of the random effects
ranef,mer-method Extract the modes of the random effects
ranef-methods Extract the modes of the random effects
refit Re-fit a model to a new response vector
refit,mer,numeric-method Re-fit a model to a new response vector
resid,mer-method Mixed Model Representations and *mer Methods
residuals,mer-method Mixed Model Representations and *mer Methods
show,lmList-method Class "lmList"
show,mer-method Mixed Model Representations and *mer Methods
show,VarCorr-method Class "VarCorr"
simulate,mer-method Mixed Model Representations and *mer Methods
sleepstudy Reaction times in a sleep deprivation study
summary,mer-method Mixed Model Representations and *mer Methods
summary,summary.mer-method Mixed Model Representations and *mer Methods
summary.mer-class Mixed Model Representations and *mer Methods
terms,mer-method Mixed Model Representations and *mer Methods
update,lmList-method Class "lmList"
update,mer-method Mixed Model Representations and *mer Methods
VarCorr Extract variance and correlation components
VarCorr,mer-method Extract variance and correlation components
VarCorr,merMCMC-method Extract variance and correlation components
VarCorr-class Class "VarCorr"
vcov,mer-method Mixed Model Representations and *mer Methods
vcov,summary.mer-method Mixed Model Representations and *mer Methods
VerbAgg Verbal Aggression item responses
with,mer-method Mixed Model Representations and *mer Methods
xyplot,merMCMC-method Mixed-model Markov chain Monte Carlo results